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View Structure Prediction Details

Protein: CE17575
Organism: Caenorhabditis elegans
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17575.

Description E-value Query
Range
Subject
Range
gi|17902560 - gi|17902560|emb|CAC83093.1| Gal-beta1-3 GlcNAc-transferase [Homo sapiens]
270.0 [0..2] [337..6]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRFNRLSVL LPILIFTFWF LCLKSSEKVE EPSLLADEAP KQNCTKNGWL GGSTAPETQD  60
   61 FGSEFMISFA NIQKNYTWLY LPTIEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSKETDILMI VASRTDSYAR RNIMRQTWMN KSNSEIVANG RMKSLFLVGL APADYKVKKM  60
   61 VMQEAKLYGD IIIVDMDDTY EELIYKSLMI FLFGVSKAPQ YKIIGKIDED IMFFPDKLMA 120
  121 LYEQGIIDST PVSLYGLVIP AGRDIFRDKT NRWYVPESAY SCSQYPAYLS GMYYMATREA 180
  181 AQMLLKSTKH RDFIQVEDVL LTGILAEDLG IPIRDMPKLY KFPHDIKKND NKDIIAWHNY 240
  241 KNNIPYLNFF MKGLARYRSE KGLTRTSTTS G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.522879
Match: 2j0aA
Description: No description for 2j0aA was found.

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