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View Structure Prediction Details

Protein: CE17572
Organism: Caenorhabditis elegans
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17572.

Description E-value Query
Range
Subject
Range
gi|109042996, gi... - gi|109042996|ref|XP_001106444.1| PREDICTED: similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosami...
CCDS3244.1_1 - null
249.0 [0..3] [338..8]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFCRRVQF WKNSVICLIV VFLFWKLQPN PKSSFVLEEH CVQSGWNIST LSPRNIDFGS  60
   61 SFIVSFANIH KSQKWIYLPK MKNV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TWKHDILMLV VSKTKNFARR NVLRSTWMNK ENSEMMKSGR MHALFFVGLV PGDQNLKKLV  60
   61 LEEAEIHGDM VVVDLEDTYD NLPFKTLALL LYGTSKASQF KIIGKIDDDV MFFPDQLLPM 120
  121 LDRNFVNSNT LSIYGHLSTA EELVLRNKTE PWYVPETAYN CTVYPVYVMG PIYLVTKDAA 180
  181 SLILDNANHQ QFMTVEDALI TGIIAQKLGI RRYSLPNVFR HRNDITEGQD VLAWHVQTKN 240
  241 DSEYKSIFTK KLSEGTSFWH F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.30103
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle