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View Structure Prediction Details

Protein: CE17562
Organism: Caenorhabditis elegans
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17562.

Description E-value Query
Range
Subject
Range
gi|55251186 - gi|55251186|emb|CAH68939.1| novel protein similar to mouse and human uridine kinase-like 1 (Urkl1) [...
272.0 [0..23] [306..225]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGHVNGTCA PVIPKVGDEE DGVGQLVANL KEKGTNFVLL KKTPQILELQ TILKDRFCGK  60
   61 INDFRYFCRK NLLILNKLLF CLKKRFSW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.221849
Match: 1xrjA
Description: Rapid structure determination of human uridine-cytidine kinase 2 using a conventional laboratory X-ray source and a single samarium derivative
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [89-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLDFKNPLIH KFSGQKRHFK RFCQIFSDFE SKFRYFHKFP GPKRSTNHSD FVFNADRLMR  60
   61 LVIEECLNHL PFTEHTVTTP TGFKYEGIQF NRGNCGVSLC RSGEAMEVSL RQCCRCIRIG 120
  121 KILIGDEQKV LYARLLPDIT SRRVLLLYPT IGSGTTVCKA IEVLKEARVP DENIYLVSLF 180
  181 ISPTGLKNIT RKYPYITVVA SDITSLYPNH FSTSYFGAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 1bd3D
Description: Uracil PRTase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.7742594473337 bayes_pls_golite062009
transferase activity 1.60567860368775 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.44242609354077 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 0.44067460027449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle