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View Structure Prediction Details

Protein: grsp-3
Organism: Caenorhabditis elegans
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grsp-3.

Description E-value Query
Range
Subject
Range
ZFP106 - zinc finger protein 106 homolog (mouse)
gi|225000866, gi... - gi|225000866|gb|AAI72483.1| Zinc finger protein 106 homolog (mouse) [synthetic construct], gi|162318...
147.0 [0..15] [99..115]
gi|109080759 - gi|109080759|ref|XP_001104463.1| PREDICTED: similar to zinc finger protein 106 homolog isoform 7 [Ma...
144.0 [0..15] [99..115]
gi|3372657, gi|7... - pir||T14273 zinc finger protein 106 - mouse, gi|46849712|ref|NP_035873.1| SH3-domain binding protein...
144.0 [0..15] [99..137]
gi|73999869 - gi|73999869|ref|XP_535441.2| PREDICTED: similar to zinc finger protein 106 homolog isoform 1 [Canis ...
143.0 [0..15] [99..138]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLALFVLF LTFFETYAQW GWGPPSPWGF RPSPFFGGRS GGWGRPGWGG GGPGWGRGGG  60
   61 GSGWGGGRGG GWGNNGGGGN WGGNGGGGNG GGGRGGGGGG GGGRGGGGGG RGGGGGGGGG 120
  121 RGGGGGGRGG GGRGRG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.08
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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