| Protein: | gei-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gei-4.
| Description | E-value | Query Range |
Subject Range |
|
|
226.0 | [0..3] | [564..168] |
|
Region A: Residues: [1-220] |
1 11 21 31 41 51
| | | | | |
1 MQQNIQYTYS SDPRSGGNQN QQLHGISQFQ QNSYQPTTYS NSNANNFHSS NSATFIPNSV 60
61 TQTPQRRMGE EKSLVNMLDA YFIDSTTPST STSWNNQQPV QMSSIQQSVG SYNQQIPQLK 120
121 VGDVDLQVEG MNVKLSSSPD KGEKDRVKKA RQAEAARMRY HRLSNEEKRE LNLKRTLAQK 180
181 RKRQREKEME ELESILRETN DIQEDPDITE QLREKRMRAK
|
| Detection Method: |  |
| Confidence: | 7.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [221-568] |
1 11 21 31 41 51
| | | | | |
1 WAEAARTRYA RMTPEERRAH NTRRRMRQMQ NAMSAIKACG MATGDPQKDD EAVRLHIKTQ 60
61 NAKKAEAARQ RYHRMNDDEK RVYNQRRTEA FRRRRMEEEM LLAMPIGRIN GEALDRAQQI 120
121 VVRNAKRAEA ARLRYQRMTP DQRKVAKQEP KEESWPSHEQ SDTQIDHDLD LGDSYNQKRY 180
181 TPKRRRNEMD DMISAGQMAV GSSGTITMGT GTPAKKDDMD ALSSLERDVV KRTQHAQQIL 240
241 LRQRANQSSG TPRSVTPPPQ AYIISNGQQQ HQQLVGNQGN NGIGQHQVLH QGHMQQQQIQ 300
301 VSHQQSSQSI PQNIYTSGMI IQNQGQQQQG QQQQQGQSQQ ILNNPYRT
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
