| Protein: | npr-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 391 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for npr-12.
| Description | E-value | Query Range |
Subject Range |
|
|
285.0 | [0..11] | [343..362] |
|
Region A: Residues: [1-391] |
1 11 21 31 41 51
| | | | | |
1 MQPPNSTGQW TEIHCDWFAE MQNYQNSLYK INFDGSPIVP MYGLVCSFGA LANFIVLLAF 60
61 VRTANLRNLR NSFIVNLAFS DLILCVVTAP VTLYTSLNLF WPFGDWSCKF LAGVQAVNTF 120
121 VSSLTLAFIA MDRVLLTLCP VRWRLAATAP LLCYGVVWII SIIVALPYAL AVSSKLAPFD 180
181 PWSDRATPKM LTYCNRQVPE ICAEMQEAWD NAIVSKTTYT FVVLGIQYIL PLAALAYAYF 240
241 QIGSTIQKRS KVSRTVDTTR RMQMQNRNRR ALLLLFLLVL TYAVCWAPMN IYHVLNGLEI 300
301 INYSQNMYIF CHLVGISSTC VNPIVYALVN ESFRNALQSM ILQFRPCYVT TTGTAATNVY 360
361 AYSATSKAEN VTLMRDPFST TPRPNERPDS V
|
| Detection Method: |  |
| Confidence: | 41.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
