| Protein: | CE17219 |
| Organism: | Caenorhabditis elegans |
| Length: | 562 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17219.
| Description | E-value | Query Range |
Subject Range |
|
|
477.0 | [0..2] | [560..3] |
|
Region A: Residues: [1-562] |
1 11 21 31 41 51
| | | | | |
1 MLRELVKKQI IENILRPQNY DSKLGHRKFS VLVLDKSAMV VVNSCLSLNE VFEEGVTLVE 60
61 DLTRNREPMP SMDAIYIISP VAESIDILIN DFSRKTKFNP GNSYRSAHIF FLDPCCDELF 120
121 EKLSKSPAVK WIKTLKELNL NLKPVESQIF TVNSQFRGDM TKTADGIVSL CATLNIHPTL 180
181 RFQSDFAQSS EICQRVEQKL KEFGNEGMGT DAELVVLDRS FDLVSPLLHE VTLQAMVVDV 240
241 TAFKDGVYRY TEAGDSKEIV LDEKDQNWLD LRHKLLPEVM KSVNKMVKDF KNTNKTEPEN 300
301 IKNQSSKDFS TTVRTLQPYL KMKAKMAAYI SLTEECRSKY FDSLEKIIAL EQDMAVEHTP 360
361 EHVRITDSQA VGRLSTFILP AIPTETRLRL ILIFMLTIGK DKDEQYFNRL LHHTDIPESE 420
421 FQIIKRMLIW RDKTQKSQFQ HRRPPPEDER FIASRWDPKI KNLIEEIYER RLDEREFKVA 480
481 GKKSTSDFRP AASARYGSGL AGKPREKRKI IIFVVGGITY SEMRVAYELS KKTNTTVILG 540
541 SDEILTPSSF LESLRDRNTV NC
|
| Detection Method: |  |
| Confidence: | 131.0 |
| Match: | 1epuA |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 4.56428593085019 | bayes_pls_golite062009 |
| syntaxin binding | 3.46044132736061 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| protein binding | 2.77285532000616 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
