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View Structure Prediction Details

Protein: CE17112
Organism: Caenorhabditis elegans
Length: 786 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CE17112.

Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKPPGPVAK RLKLKDDSVS GSDSASTRTS RKTRGKMMRS NEKIGTLTMD EAIKAAEKIT  60
   61 GFQKIDLRLT HRRDSDAANS MKWISTFDED DVVIQRKLCM ICKQSPMDAF FKSHVAQAHP 120
  121 ATPSEASEVM RRLSDVRYSR FCQNGQISKE SIQKMFPTIS PILLINFLAG LGFIICRKDY 180
  181 NKKSVNFEKK YQGSDVRGVS KSEANEILNS LKQNSIRFLD ELEFSAEIVT NARMLD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSTQSTVQCH ICDKISNLKN FTRHMQIHRD SLEILGIKYS LDDVIEIFKR ITDVRNTLYY  60
   61 AAQPISQSKI MEICEGNVEV QRKLVSFLLD AGFVVADTSK YESLAQKIIV MDPEMPELIE 120
  121 VKEEPEDCDE KYELPILEVS EPGSSEPSES RTRSRSSSFP FSAFQQIVFY KNVSDTSSIS 180
  181 STSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [421-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TESRIILRPC SSPSDEQFPY CVLNAIPEHF EVEHALFDIL EAMTDDSEFK LEKSQFGFLL  60
   61 GYTMYCLVVA NGSKQNVISR LTLGDFRNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [510-786]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIDEQSGLHY FSFSTKTTCK KLDTLEYLCA DERIWRALEI FEVARERRAL EMKWSTLNEN  60
   61 SAPFFFSFVS PSPIVKDTNY WLSIFLRSCG IDWLCKSNNI CSAAWSLVFR DSNKTSHQQY 120
  121 AITYFKLLRE KERSQIQFLD GGLAGHPTYR KISSVVISKK RKNHIVPHEK IRKKQKRYRT 180
  181 PERIGIPNRP RGGDHKSLDF KRRTGRYVEP ESPEDSDETD KVQESVICHV KEDPIDSTYF 240
  241 DSCECIPTPL EMTSHSSSQL YQQYRVKVEG DVTLTCL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle