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View Structure Prediction Details

Protein: CE16987
Organism: Caenorhabditis elegans
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16987.

Description E-value Query
Range
Subject
Range
gi|109123815 - gi|109123815|ref|XP_001113968.1| PREDICTED: similar to solute carrier family 35, member E1 [Macaca m...
148.0 [0..2] [319..319]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAVAPIFG VLGSCMGCMV FVENIAKQEP SAMNLMTFST FLFISTVGLV STSKFFTVKN  60
   61 QIPLKGYFKT VTMFFIVNVV NNQALNFHVP VPLHIIFRSG SLLATLILSV VMVGKSYSAR 120
  121 KYISVFAITI GIVICTLATS TQGDSGLSM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.91
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [150-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEASKHYKEW TIGIIMLTFA LLASAVLAIY QQQMYEKYGK HPDEAMFITH LISLPFFLIM  60
   61 GSDIVSAATK LSASAPHSVF PWLPSLWVDL IASCLLQYGC IKYVYQLNSR VDSLTVTLVV 120
  121 TLRKFLSLIV SIVYFKNPFT PQHWLGAILV FAGTLAFADI WGSQTANKQD EKKKQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.229148
Match: PF03151.7
Description: No description for PF03151.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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