YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE16932
Organism: Caenorhabditis elegans
Length: 572 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16932.

Description E-value Query
Range
Subject
Range
CE31451 - status:Confirmed UniProt:O44153 protein_id:AAK29791.2
646.0 [0..3] [572..5]

Back

Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRFKFFAA IREYNPEGEV FLRIIGTGSN NNLTYRIMES RLNEVGISLG SFLSAVVPMG  60
   61 EPIRDFVPEE RNFKVIIDGI VAMVENIEGN LEKNEEGVLV FSTEDFGLVR ALDQKLSPGQ 120
  121 YQITVRATKF SERKIFKNMN YCAEAQKIAP LVTATESESI FKRVASFFQK SPEENSLEST 180
  181 SKQANEEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSVQDLSMA ELIEILPNLD QKSINQPTPA PRSMVGSVGI TRTMNALVCD VIHQEKECIH  60
   61 FLWICEIQQI SMFASKSHYL SPGKFFEGLF EKKETNWECI RFVGEKKELL KGITDGDKFK 120
  121 VTLTNEQGFP VFTVENLYAK LIAFEGKFVF HNKTFGNAII GCYRPPGDYK ITIKLLPIPF 180
  181 TTPTGKFICF EAIHFES

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [386-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADVLSSSNTN TTENKKKVTE KVKERGIRRP QDPKSKGIQR AVVIRVIEKG NSTDYIVWNL  60
   61 DSKMECIFRS AKHELERGHF FSGKFVKKSD GSLMCTNYVK QIKGFVEGGL DEHENIYFTV 120
  121 PIQNFQAARG NRKYNCAFSE YFGEVLEGKA ENTKLSSNCN GKTVNIEWKK IGASGSDEYV 180
  181 WIVSKIF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.886057
Match: PF03312.6
Description: No description for PF03312.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle