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View Structure Prediction Details

Protein: CE16914
Organism: Caenorhabditis elegans
Length: 544 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16914.

Description E-value Query
Range
Subject
Range
gi|68389434 - gi|68389434|ref|XP_691920.1| PREDICTED: similar to solute carrier family 17 (sodium-dependent inorga...
202.0 [0..5] [539..76]

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Predicted Domain #1
Region A:
Residues: [1-544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSMALAER KNQNPNKSKP DPKEKKSSKK GKKSKNTEEQ EDKTKTEETQ EEIVPDPLKE  60
   61 DAKILPDLVS RSSIISAFES DGSRWFLLVS VALLNFSNTC SWIAYAPVGN YVNALYGEES 120
  121 AAWFSMIYMF VSVPFGFIGM YIGSKNTLNV PLIAACVLNA IGALIRALST QPQVDPQNRF 180
  181 PICLLGQSIA AMAYPFIMFL PSKISATCFP PSQRTIATTI GVMANPLGVM VVNLVAPLIV 240
  241 QSSDDVWILN VILFIICFVA LFFAGCSLGC LKPDETKQRK SNDYATSCGS VFGNLNYDIL 300
  301 MFALGGGIGM FNSLYTMMLQ MLCPSGYGNQ VAGICAVLMI GCGMIGATVA SIYVDKHKNY 360
  361 RTAMIVLMNF AVIFGVGFLW MSKVPNMSLI LFFISGAFGF CGLAAYPVGL ELAIECTYPA 420
  421 APEVSSGFIV LVGQLFSVLI VAIIKIGAKS LSFVDSDFGV EACRAHAEDA INVPKNYDNP 480
  481 IIIITFIAVL IAIVVWFLRE DYRRLRREMT NAPNRTRTTV STTTIVGATT QESDPLNPST 540
  541 SEQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle