| Protein: | CE16886 |
| Organism: | Caenorhabditis elegans |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16886.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..7] | [357..361] |
|
Region A: Residues: [1-395] |
1 11 21 31 41 51
| | | | | |
1 MTSASLAGIS ISPIVPEELD GTIAPIGTQP MDITLAFVFS AISVIGVLGN LLVITVVLKV 60
61 RGMKTPTNCY LVSLAASDTL FFFASMPHEM MYLLGPNDHY LFGSLGCVLL TYLPYLAMNT 120
121 SSLSILAFTI ERYYGICNPY KARTMCTVKR ATCIICGIWI FSMLYHSYWL FLATLIKDDI 180
181 GTSCSFRLER NSHAYKIVFL LDFVLWYVLP IMCDIIIYAK IGITLSQCGD KIKKSVKPKI 240
241 PNEVIVEKSK TSSTSMGHYS GRDSHISGKR NSAKGRNQVV KMLAIVVAVF AVCWLPYRGM 300
301 VVYNSFVSDP KYSWSPDWYI NLSKTLVFIN CAINPILYNL MSARFRAAFR SLLSKRKNSG 360
361 FKSTALNQRH RLNTMDIMSS AEPKSPLITS MAGTP
|
| Detection Method: |  |
| Confidence: | 41.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
