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View Structure Prediction Details

Protein: CE16852
Organism: Caenorhabditis elegans
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16852.

Description E-value Query
Range
Subject
Range
gi|7495294 - gi|7495294|pir||T25496 hypothetical protein C03G6.5 - Caenorhabditis elegans
195.0 [0..3] [193..35]
gi|157760253 - gi|157760253|ref|XP_001672469.1| Hypothetical protein CBG00775 [Caenorhabditis briggsae AF16]
gi|39589026, gi|... - gi|39589026|emb|CAE57758.1| Hypothetical protein CBG00775 [Caenorhabditis briggsae], gi|187038758|em...
172.0 [0..3] [195..6]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCYTILGAF LLAIVYGSSP NSETSIIESG TGTNCTELTF KKFFVCLYRF GDFMTKMYFL  60
   61 DVKSPNSMNK FKTSCLSMAD CTESFECQNN KEPTDSSKKV RESCETLNFL GTDFITCLTK 120
  121 LEELKPAPEC YKTWGPFDGF IIKDKLPDEL CKNMVGKDNC MKKLVSETCG EEDSQKLLNM 180
  181 LKNTTEYRHC DFSKL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 78.443697
Match: PF01579.9
Description: No description for PF01579.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle