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View Structure Prediction Details

Protein: CE16736
Organism: Caenorhabditis elegans
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16736.

Description E-value Query
Range
Subject
Range
CE20432 - status:Confirmed UniProt:O62515 protein_id:CAB05318.1
266.0 [0..20] [328..4]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLMKSLRFV VLSTRGFASK PIVDFSSAGK VLSVEQKQFY QKNGFLLVRG CVAKDELKKY  60
   61 ENQFNAICER KVKPPPNMLV MKDVSIAKKV TPDSIDTITK VQDFTDEPVL FSYCENKKVT 120
  121 DVVRDLIGSP DTRITAMHTM LINKPPDTGA LTSRHPMHQD LIYFPWRPEE LTVCAWTAME 180
  181 KINKQNGCLQ VVPGTQARGL QVHGYPEWEG GVNMAYYAIK DYDMSLPREY VEMEAGDTVF 240
  241 FHPCLFHGSG ANRSEGFRKA ISCHYANYDH TKYIDVKGTA QEEAGKQIED IIRKHPKRYA 300
  301 VKPGQEVTFE LTWRLRSRPV HHDGKENL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 2a1xA
Description: Human phytanoyl-coa 2-hydroxylase in complex with iron and 2-oxoglutarate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phytanoyl-CoA dioxygenase activity 3.78714791672545 bayes_pls_golite062009
binding 1.11496554603865 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.839768636546836 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009
protein binding 0.323463866258272 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle