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View Structure Prediction Details

Protein: CE16654
Organism: Caenorhabditis elegans
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16654.

Description E-value Query
Range
Subject
Range
gi|109111848 - gi|109111848|ref|XP_001094584.1| PREDICTED: similar to CG11596-PA, isoform A [Macaca mulatta]
541.0 [0..18] [365..256]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQEPTEPT AINEETRAME EVINAFFYYG RYGAEKMVSM VEQMRKIPND HQLLLGGQFK  60
   61 EHIRNMKEKV EHNSQILRMI ANSCAGMFGE DH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.19
Match: 2b25A
Description: Human putative tRNA(1-methyladenosine)methyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [93-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRAMRIHQTR RPSSDFMSKV FSTMRQICRE WSSEGQPERE ATFKPIIDQL TELYPPETHP  60
   61 RHNVRILVPG CGLGRLAYDL MEQGFTVQGN EFAFFMLFTS FFIINNCKQE NQFTIYPFVF 120
  121 DKNNSWNYSD QLRPVTFPDK APVSKKDPNH RRASFSICAG DFLEVVKDTT FDVIVTAWFI 180
  181 DTAHNVLEYI DAIYSTLEPG GVWINVGPLT WHFSDTPDEA SIELPYSVIM EMIRKKGFQV 240
  241 VEERVIDSKY TVNRRAMQFN QFACAYFYAR KPEKTDE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.6
Match: 1vlmA
Description: Crystal structure of SAM-dependent methyltransferase, possible histamine N-methyltransferase (TM1293) from Thermotoga maritima at 2.20 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 1.0221592961184 bayes_pls_golite062009
catalytic activity 0.403277401956396 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle