| Protein: | twk-33 |
| Organism: | Caenorhabditis elegans |
| Length: | 631 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-33.
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..94] | [449..128] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MTSEQQNNYY PRGNVPRHSA VLEEIHEEEQ DSIPEEDETN LEKPSHSEND FKRKNAIRSE 60
61 ETPEISPEIQ RIEDPLASSD EEENEKPFAR SISVSNADLE ERHRLDSIPE NDRSQQSRYT 120
121 RHSSIDKGIL KPQNNSEDVV EKYYERNN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-631] |
1 11 21 31 41 51
| | | | | |
1 YTVTGRDRPD FYNKLPGRLQ HRLSVHTDAA SRFSSPGAMG EPVVPTLRRF DKSMYWFAFH 60
61 RKQIGFRHFS VVILVLLYTL LGAVMFWTVE SRHEKAKTLD HVNNLEHLLD RLAENITESV 120
121 NNINTTTTEE EMKVYIREAY IELMKLEGQY KGSTYYKLEA DDNWKWTFES AFFFSMNVYT 180
181 TTGYGSIAPE STLGQVLVCV YGFIFVPVTL VVLRDLGQFF LVHLTKLYAH GIQKFRELNG 240
241 NKHVDEDEII SLPIKACLLL LASYLGACTI FIYFYDELSG PEPGTGMDMF LCFYFSFISL 300
301 STIGLGDIMP NNATVGNNRN IYENEKIKFA PIISIIFFFG MAVTKVVNRN TFIAVENGIF 360
361 GAFTLVENKL DAIVTRSSAS VKPEDRPSTP KVQRALSVDA GSEVQDETPN EILNNLTVRS 420
421 IATFMKSNAD IYGGGFGRVQ LRRGDLIHSD SQNQMTVNSM SQLRHRTASQ SQPNQATGGN 480
481 NNV
|
| Detection Method: | |
| Confidence: | 29.30103 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
