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View Structure Prediction Details

Protein: prs-2
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prs-2.

Description E-value Query
Range
Subject
Range
SYP_PSEE4 - Proline--tRNA ligase OS=Pseudomonas entomophila (strain L48) GN=proS PE=3 SV=1
gi|95112071 - gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
375.0 [0..3] [451..1]

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Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFKARKWIL SGASAQKSKS MAHTMLVENG FILPTAKGFY SLLPLGQRVI DKLCRILDVE  60
   61 FQNSGALKIA MPIVGTQQLW EKTGRWEAMG PEMIRFHDRQ QNHMCLQPTA EEMCTELIAT 120
  121 LSPLKKSQFP LIVYQIGEKF RDEMNPRFGL MRGRQFLMKD MYSFSTDAET SQQTYAQIRQ 180
  181 IYDRIFGEIL QLDEDVIKVE ADSGVHGGHI SHEYHLKSSL EEDFVNFCEN CKNHNKFEGP 240
  241 GPAKCEKCAE NSSKTVQKIP SVEIAHTFHL GTKYSEALGA KFQGKPLDMC CFGIGVTRLL 300
  301 PAAIDLLSVS DKALRLPRAI APFDAVIIVK KSLMSNVIVE MASSSASRYL KGGILLDDRV 360
  361 EMSAGKRIHD ANRLGIPFIL VIANETERSL ATQKPVIEVF TTHAKSAEPM SQGSMSLDRF 420
  421 VTFVQSTLYG GGGAHDSGHL AHNQVLDQLG SHQH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.0
Match: 2j3lA
Description: No description for 2j3lA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle