| Protein: | clec-38 |
| Organism: | Caenorhabditis elegans |
| Length: | 382 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for clec-38.
| Description | E-value | Query Range |
Subject Range |
|
|
214.0 | [0..72] | [378..318] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MAIFYDDPLE RLNQPIKTKS YRKKQVVQRV HVFIFDNWKL ILLGILNLIF LIIAIVFAIL 60
61 FFVGSADCAQ LPDYTTSPAS QLTTSAISSR TSEVQTNAIT TTQGTPSNKT STTTPST
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-251] |
1 11 21 31 41 51
| | | | | |
1 SKVICASGFT LVGTKCGKLV SSNQPRTEAD SICKGYGGST LFSVRNEQET RDMLDFVKDS 60
61 NIDFLWTGLV CNQTARTSCI WDVKSGTTAD YNNFADGFPN VVYGYCIYFI VTGNSAGQWG 120
121 SEQCSQLMNF VCEL
|
| Detection Method: | |
| Confidence: | 16.045757 |
| Match: | 1bj3A |
| Description: | Snake coagglutinin alpha chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.898007087596805 | bayes_pls_golite062009 |
| protein binding | 0.182614790301811 | bayes_pls_golite062009 |
|
Region A: Residues: [252-382] |
1 11 21 31 41 51
| | | | | |
1 PTTIRDPDCK YNYNKNCYIR FDITLTIPQA QRFCNEKGAD LVSIHSANEN RFILTIYDIH 60
61 GQILLGGLAP AVDFIVWLDG SPTTYSNLLY FYDTRSCVLM TVARGGPYDG DWYTMNCNFQ 120
121 EFFLCKRAID F
|
| Detection Method: | |
| Confidence: | 22.154902 |
| Match: | 2h2rA |
| Description: | No description for 2h2rA was found. |
