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View Structure Prediction Details

Protein: pqn-70
Organism: Caenorhabditis elegans
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pqn-70.

Description E-value Query
Range
Subject
Range
gi|187021257, gi... - gi|39591974|emb|CAE75194.1| Hypothetical protein CBG23140 [Caenorhabditis briggsae], gi|187021257|em...
gi|157762942 - gi|157762942|ref|XP_001673813.1| Hypothetical protein CBG23140 [Caenorhabditis briggsae AF16]
158.0 [0..120] [243..187]
pqn-70 - status:Confirmed UniProt:Q22558 protein_id:CAA98546.1
77.0 [0..1] [108..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSGMGVDA NGKPIKRQPT TNNNNKKAGN NSNNQKKGNN QNNKNNKNQN GGNRNQNRQH  60
   61 HQPPMMQMVP PFGPMGPGGP GGPGFMGPPN GNMNFFNGQN RRNGSGKNNG NRNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPSGYNGPS ANNVGQGAIG NNMNGAQPFA GPEPSMEVPG FGKNSNIHEL FGKMIWRKME  60
   61 QINDAALVDQ LQNRIMNLIH DALASQNDKQ QQQQQQQHQQ GFNQQRGMPF GGPGNQNGPF 120
  121 GNNAGFQRF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.718 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.718 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.601 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.601 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.581 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.581 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.549 N/A N/A a.118.8 TPR-like
View Download 0.549 N/A N/A a.118.8 TPR-like
View Download 0.539 N/A N/A f.1.4 Bcl-2 inhibitors of programmed cell death


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle