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View Structure Prediction Details

Protein: set-14
Organism: Caenorhabditis elegans
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set-14.

Description E-value Query
Range
Subject
Range
gi|109018318 - gi|109018318|ref|XP_001106482.1| PREDICTED: SET and MYND domain containing 2 [Macaca mulatta]
225.0 [0..2] [423..28]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPPDALHE NVYAFALARD QVESYCNQCL TSMAELKKCS ACRRLAYCSQ ECQRADWKLH  60
   61 KVECKAIKTH NEVANDSIRL VMRIAGKLSR NEDGEIEAYY IPGVARNFQN LEHHPSSYDA 120
  121 DEESFVKEYF QFAIAPHPDR DLIKLIFQKV SINSFVVGNS TGNPIGVGLC IKLSAANHSC 180
  181 KPLTRVCYRN RTAMLVPVSS ELPSTLEGAC HSYIDELMPR DMRRDTLKKK YKFLCQCDGC 240
  241 LDEDRNARME AWTCGICVKG WMRNKENGQC ELCGWTM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.99
Match: 1ml9A
Description: Dim-5
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation initiation factor activity 2.09326682440555 bayes_pls_golite062009
binding 0.747308842587152 bayes_pls_golite062009
catalytic activity 0.414880787313138 bayes_pls_golite062009
protein methyltransferase activity 0.202239585753819 bayes_pls_golite062009
histone methyltransferase activity 0.0650988951222092 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [278-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKDHFELCRT AEEAGIAARS RLANDAIPLE TKRNLCEKLL DLFQDTLHDH NVHRIPVLRC  60
   61 LYICSLAAQN ITAAAKTGGT LLSIMLVYQN TTDPAILFQK YQLAQLFCAA GAKTQATKLL 120
  121 QEIEEPLEKI YTPDSMICRN VYCMILKARN LS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1na0A
Description: Designed protein cTPR3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle