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View Structure Prediction Details

Protein: CE16256
Organism: Caenorhabditis elegans
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16256.

Description E-value Query
Range
Subject
Range
gi|39589189, gi|... - gi|39589189|emb|CAE57922.1| Hypothetical protein CBG00975 [Caenorhabditis briggsae], gi|187038635|em...
gi|157748913 - gi|157748913|ref|XP_001678170.1| Hypothetical protein CBG00975 [Caenorhabditis briggsae AF16]
148.0 [0..13] [132..362]
CE01739 - status:Confirmed UniProt:Q09384 protein_id:CAA88441.1
134.0 [0..11] [132..5]
FBpp0292096 - type=protein; loc=X:complement(20752921..20753568); ID=FBpp0292096; name=I-3-PB; parent=FBgn0261624,...
129.0 [0..9] [124..44]
gi|108876369, gi... - gi|157116634|ref|XP_001658586.1| hypothetical protein AaeL_AAEL007679 [Aedes aegypti], gi|108876369|...
96.0 [0..4] [103..23]
gi|125986849, gi... - gi|54645517|gb|EAL34255.1| GA12683-PA [Drosophila pseudoobscura], gi|125986849|ref|XP_001357187.1| G...
95.0 [0..4] [106..8]
PP1RB_DANRE - Protein phosphatase 1 regulatory subunit 11 OS=Danio rerio GN=ppp1r11 PE=1 SV=1
92.0 [0..4] [98..7]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSNTTTTT LVVKSEDQEE VQEEHVLRLR APPSPPHVTW AEGVVDNEHM GRLKSNCCCI  60
   61 YVAPRQWDDP STWEPNEYET EHCRGHTLPE RKKKKEDGGD EGDDENKENK DNKDNKDNKD 120
  121 NKDNNGCGCD HC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.69897
Match: PF07491.2
Description: No description for PF07491.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle