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View Structure Prediction Details

Protein: dhs-8
Organism: Caenorhabditis elegans
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dhs-8.

Description E-value Query
Range
Subject
Range
gi|115250215, gi... - gi|126698778|ref|YP_001087675.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile 6...
gi|255306086 - gi|255306086|ref|ZP_05350258.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile AT...
gi|255100197 - gi|255100197|ref|ZP_05329174.1| 3-oxoacyl-[acyl-carrier protein] reductase [Clostridium difficile QC...
263.0 [0..80] [345..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSTTNTVS PEDDINRCEE TIRKGMTMGR SIKGSGGYIL ISSDPLFGLL FLQLSKTKMS  60
   61 QANRVRLFHS RTHAFEVLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [80-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIDVSGKTFA ITGTTSGIGI NTAEVLALAG AHVVLMNRNL HESENQKKRI LEKKPSAKVD  60
   61 IIFCDLSDLK TVRKAGEDYL AKNWPIHGLI LNAGVFRPAA AKTKDGFESH YGVNVVAHFT 120
  121 LLRILLPVVR RSAPSRVVFL SSTLSSKHGF KKSMGISEKM SILQGEDSSA STLQMYGASK 180
  181 MADMLIAFKL HRDEYKNGIS TYSVHPGSGV RTDIFRNSLL GKFIGFVTTP FTKNASQGAA 240
  241 TTVYCATHPE VEKISGKYWE SCWDNDKIDK KTARDEELQE ALWKKLEQID DRINGSIDTF 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.522879
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle