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View Structure Prediction Details

Protein: mboa-2
Organism: Caenorhabditis elegans
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mboa-2.

Description E-value Query
Range
Subject
Range
gi|157762990 - gi|157762990|ref|XP_001673837.1| Hypothetical protein CBG23107 [Caenorhabditis briggsae AF16]
gi|39591950, gi|... - gi|39591950|emb|CAE75170.1| Hypothetical protein CBG23107 [Caenorhabditis briggsae], gi|187021281|em...
370.0 [0..1] [496..3]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQQTGRRRR QPSETSNGSL ASSRRSSFAQ NGNSSRKSSE MRGPCEKVVH TAQDSLFSTS  60
   61 SGWTNFRGFF NLSILLLVLS NGRVALENVI KYGILITPLQ WISTFVEHHY SIWSWPNLAL 120
  121 ILCSNIQILS VFGMEKILER GWLGNGFAAV FYTSLVIAHL TIPVVVTLTH KWKNPLWSVV 180
  181 MMGVYVIEAL KFISYGHVNY WARDARRKIT ELKTQVTDLA KKT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDPKQFWDLK DELSMHQMAA QYPANLTLSN IYYFMAAPTL CYEFKFPRLL RIRKHFLIKR  60
   61 TVELIFLSFL IAALVQQWVV PTVRNSMKPL SEMEYSRCLE RLLKLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [330-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPNHLIWLLF FYTFFHSFLN LIAELLRFAD REFYRDFWNA ETIGYFWKSW NIPVHRFAVR  60
   61 HIYSPMMRNN FSKMSAFFVV FFVSAFFHEY LVSVPLKIFR LWSYYGMMGQ IPLSIITDKV 120
  121 VRGGRTGNII VWLSLIVGQP LAILMYGHDW YILNFGVSAV QNQTVGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle