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View Structure Prediction Details

Protein: CE16156
Organism: Caenorhabditis elegans
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16156.

Description E-value Query
Range
Subject
Range
APMAP_MOUSE - Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1
246.0 [0..2] [387..35]

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Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFFFFGFV GLLLSWGALY YRYSDEKNTS ARKYRFDPPP ALVGNLFINA GLEKAEHILD  60
   61 GKIVGPESMV VDDEAIYVSV NDAKVLKIVD GRVVSKASYS EKSKFFPDCG HFDTEPECGR 120
  121 PLGIRRLVAG KPKFVVCDAY LGVYIVDFTD EQNPISTQIL DSKVPIDGLK PRFLNDLDVI 180
  181 SEDELIISDS STRHDRRHFM AAILEHQADG RIFHLKISTK SVKVLADKLY FPNGIQLTED 240
  241 KKSVIFAECS MARIKKLTIA SKKVEMFAAN LPGLPDNIRS SGRGTYWVGL TATRSATHPS 300
  301 LLDRLGSLPG IRQFLVDIVP GPYWKPLLGL FKNPHSIIIE LDSVGKIVRS LHDVTGKHVG 360
  361 DASQVTEHNG HLYIGSFADH YIAKVKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.045757
Match: 1v04A
Description: serum paraoxonase by directed evolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.466814313865256 bayes_pls_golite062009
catalytic activity 0.231415846654952 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle