| Protein: | nud-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nud-1.
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..3] | [318..6] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MSQYERFDSV LLSMAQQLSG GVPEMLDVLF EFLSRKTDFY SGAGVDQART LLLEKFDKHG 60
61 GKAMKEAEEA KKRKEEQERK LAERRAAQKA KEEEEFRNAK VVEVTDEEAA AFEKEQAKNS 120
121 VENLEKFVDN EGETSKDAEV EDEDS
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [146-263] |
1 11 21 31 41 51
| | | | | |
1 KLMKPNSGNG ADLAKYQWTQ TLQELEVKIP IAAGFAIKSR DVVVKIEKTS VSVGLKNQAP 60
61 IVDGKLPHAI KVENCNWVIE NGKAIVLTLE KINDMEWWNR FLDSDPPINT KEVKPENS
|
| Detection Method: | |
| Confidence: | 47.0 |
| Match: | 1wfiA |
| Description: | Nuclear move domain of nuclear distribution gene C homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.7774714353448 | bayes_pls_golite062009 |
| protein binding | 0.643437066451821 | bayes_pls_golite062009 |
|
Region A: Residues: [264-320] |
1 11 21 31 41 51
| | | | | |
1 KLSDLDGETR AMVEKMMYDQ RQKEMGLPTS DEKKKHDMLQ QFMKQHPEMD FSNAKIG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
