| Protein: | gi|25395639 |
| Organism: | Caenorhabditis elegans |
| Length: | 201 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25395639.
| Description | E-value | Query Range |
Subject Range |
|
|
267.0 | [0..1] | [201..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MESLNEYMDK IINRLKAVNE KDELVDEGMR KLQKCQEKIM KTRIDAQKHI DERHEQQSFE 60
61 QQLLNKNMFE TEQLEEKLKR LDDENKIGNE REFNNRTSPT SWSNSGF
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.732 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.661 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.659 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.659 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.648 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.599 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.585 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.533 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [108-201] |
1 11 21 31 41 51
| | | | | |
1 HPRINYAFFS CILNHFIYYI VLAEDCGFSC DVVVSTGAGL TLARDSSEEE DDDEEDEDDD 60
61 EEDDEDVEED GQEAEALRFK VFGQNSPFGF TSQS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.385 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.380 | d.93.1 | SH2 domain |
| View | Download | 0.339 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.339 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.337 | c.47.1 | Thioredoxin-like |
| View | Download | 0.337 | c.47.1 | Thioredoxin-like |
| View | Download | 0.331 | d.93.1 | SH2 domain |
| View | Download | 0.313 | b.61.2 | Metalloprotease inhibitor |
| View | Download | 0.300 | d.93.1 | SH2 domain |
| View | Download | 0.298 | d.93.1 | SH2 domain |
