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View Structure Prediction Details

Protein: CE15898
Organism: Caenorhabditis elegans
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15898.

Description E-value Query
Range
Subject
Range
gi|114657942 - gi|114657942|ref|XP_001175098.1| PREDICTED: hypothetical protein isoform 12 [Pan troglodytes]
702.0 [0..1] [561..1]

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Predicted Domain #1
Region A:
Residues: [1-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSQVQDVE LAEAGDTINE VKASSASGRG RLARRMTIEE EHAGDYFKQE QKLAAVPATT  60
   61 HMEHLCRLDI REAPHLVRQT GIICTIGPAC ASVEMLQKLI LNGMNIARLN FSHGSHEYHA 120
  121 GTIANVREAA DSFSDKRVIG IALDTKGPEI RTGLLAGGAS AEIELARGAS IRLTTDPHFS 180
  181 ESGTAVNLFV DYKNIAKVLS VGSRVYIDDG LISLIVEELQ TDAVICSVEN GGMLGSRKGV 240
  241 NLPGTIVDLP AVSEKDCKDL QFGVEQGVDI IFASFIRNAE GIRTIRKVLG EKGKKIKIIA 300
  301 KIENQEGVDN ADEIISESDG VMVARGDLGI EIPAEKVFLA QKMLISKCNR AGKPVICATQ 360
  361 MLESMVHKPR PTRAEGSDVA NAVLDGADCV MLSGETAKGE YPVDALKIMH YICKEAEAAV 420
  421 YHRRLFDELL QNTQKPTDMS HTIAIAATSA AASCHASAIL LITTTGRSAI QCSRYKPAVP 480
  481 ILTISRDVAV CRQLHLYRGV FPVHYPAERA ADWPTDVDNR INHAIAIGKD RGFIHKGDFL 540
  541 VVVTGWRQGA GATNTLRIIT AE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1t5aA
Description: Human Pyruvate Kinase M2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle