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View Structure Prediction Details

Protein: stdh-2
Organism: Caenorhabditis elegans
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stdh-2.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
287.0 [0..44] [297..2]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIQWFATGV GAAVVLYIFY HFIRIILNIL VPYAFCQPID LKKKAGASWA VVTGATDGIG  60
   61 KSYSFELARR GFNVYIVSRT QSKLEQTKKD ILEKQPDIEV RFATYDFTNP SVTDYEKLLS 120
  121 KLNEVSVGIL INNVGMFFDY PEMLHKINGG IDSIANVIII NTLPATLLSA GILPQMVSRK 180
  181 AGIIVNIGSF AGVVKLAEWS IYSATKKYVE WLTGCLRKEY SHHGIIFQAI TPAMVATKMA 240
  241 GNPNTSFFCP DSDTFARSAL NTIGHASETT GYIAHQIQCE ILKLLPDFVI DRSIKKGNAE 300
  301 FREKALAKSE NKPLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.0
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle