| Protein: | CE15683 |
| Organism: | Caenorhabditis elegans |
| Length: | 203 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15683.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..1] | [203..1] |
|
|
126.0 | [0..1] | [172..13] |
|
|
119.0 | [0..1] | [193..13] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MSVESSNQTT SLSSYLLKCA FSFGTAPPSL SPPSSTGSYE EADFSRFVQQ NETGHKLTSY 60
61 QSLANRDPCT IPDEL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.546 | a.77.1 | DEATH domain |
| View | Download | 0.507 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.473 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.464 | a.4.1 | Homeodomain-like |
| View | Download | 0.446 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [76-203] |
1 11 21 31 41 51
| | | | | |
1 HQEMKSLKKK EEAFKTSLCG FHRRGQKCAY GEKCKFAHSV HELRFPQTKR NHRNYKTVLC 60
61 NNFSTTGHCK YGIRCQFIHR SMDSTSSNQS NETENITIDL NVQSDVFRAF ALDSTSSLPN 120
121 WHCSALLH
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
