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View Structure Prediction Details

Protein: tag-141
Organism: Caenorhabditis elegans
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-141.

Description E-value Query
Range
Subject
Range
gi|114582567 - gi|114582567|ref|XP_515998.2| PREDICTED: solute carrier family 39 (zinc transporter), member 10 [Pan...
215.0 [0..4] [359..520]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSEGPVMFD TVLYGVISVT VVSLLSLGGA CIGPLMTKDA KHRWLHFFLA MAVSTLSSDA  60
   61 ILHIIPQVVG VHDHGHNHGH SHEHHHEHTD LENGTSGHGH SHHHDDSDRI MWYTVTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARKNLLRLSV IVLSIYILYF VEFFMFYRKT HLHYCSPSTK SPVITSSVST HSDIKSSASN  60
   61 HSITGSEEDN NNDSSKKERR NSVELEKRRE QGGHELISLR EDGDDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [224-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTEICGLKPR ALIILFGDGV HNLVDGLAMG ASFMISVKLG FITTIAVICH ELPHEIGDLA  60
   61 VLIDSGLSMC TALILNLLSA LTAYAGLFIA IVLGRDEEIE TILLAITAGM FLYVAWVDMA 120
  121 SLNTLIVFNN LYYSFHI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle