| Protein: | wrt-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 484 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrt-1.
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..1] | [484..2] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MVMNPLTATF LAALIGTAAS ASCGSSGIPF RFEVLPSGQP VLGCGSPTCF GAENGGRDLR 60
61 HDSSFMAGAD GDDGFFRDGD LARVRVRDPD APAQMANCPR EFSSSSC
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-287] |
1 11 21 31 41 51
| | | | | |
1 SNPMTWVGGF KASDNGDLSL QCCHYEGLRF AQEVGRPVVH PGEVYSGGEV LRDGRQTGFD 60
61 AISNVRKITS GDGTVAYEVT VTRMNCLPNP GEESNEVSFD IQRDIGRILD KVGETAASGV 120
121 QTNHIEADQR LSPSTDVQSD SYVSPTEADP QEPVEQFVQV GEQVVPVTSA GYYYPVASGV 180
181
|
| Detection Method: | |
| Confidence: | 27.221849 |
| Match: | 1vdzA |
| Description: | Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [288-484] |
1 11 21 31 41 51
| | | | | |
1 PACFTGNSKV MTPAGEKSMA DLSVGDMVMT YEYGKMTYTR VASWLHRLPD TKAAFIKLTT 60
61 EQGAIIDMTP QHFIYKANCV TEEMELVYAE DMTIGDCLMV KENEKLVMTT ISEKSTFYET 120
121 GVYAPMTETG DLIVDDVYAS CHNVVKANTL SHTFLNFATS VQQKMRSVLG SLEETGHLPA 180
181 TSEFFLNIID VLLPHKY
|
| Detection Method: | |
| Confidence: | 25.045757 |
| Match: | 1at0A |
| Description: | 17-KDA FRAGMENT OF HEDGEHOG C-TERMINAL AUTOPROCESSING DOMAIN |
Matching Structure (courtesy of the PDB): |
|
