YRC Public Data Repository - Protein Structure Prediction

Protein:	dpy-30
Organism:	Caenorhabditis elegans
Length:	123 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-30.

Description	E-value	Query Range	Subject Range
gi\|254675172, gi... - gi\|254675172\|ref\|NP_001101525.2\| adenylate kinase 7 [Rattus norvegicus], gi\|109479922\|ref\|XP_0010694...	123.0	[0..6]	[112..622]
KAD7_MOUSE - Adenylate kinase 7 OS=Mus musculus GN=Ak7 PE=1 SV=1	121.0	[0..17]	[112..520]
gi\|14578322 - gi\|14578322\|gb\|AAF99488.1\| PV1H14210_P [Plasmodium vivax]	120.0	[0..6]	[117..760]
gi\|58047711, gi\|... - gi\|58047711\|gb\|AAH89169.1\| Ak7-A-prov protein [Xenopus laevis], gi\|148223191\|ref\|NP_001081046.1\| ade...	118.0	[0..7]	[113..602]
gi\|157762504 - gi\|157762504\|ref\|XP_001673594.1\| Hypothetical protein CBG23403 [Caenorhabditis briggsae AF16] gi\|187021038, gi... - gi\|39592193\|emb\|CAE75413.1\| Hypothetical protein CBG23403 [Caenorhabditis briggsae], gi\|187021038\|em...	117.0	[0..1]	[123..1]
gi\|58332556, gi\|... - gi\|58332556\|ref\|NP_001011352.1\| adenylate kinase 7 [Xenopus (Silurana) tropicalis], gi\|56788828\|gb\|A...	117.0	[0..7]	[113..602]
gi\|76666111 - gi\|76666111\|ref\|XP_588569.2\| PREDICTED: hypothetical protein [Bos taurus]	109.0	[0..34]	[112..643]
gi\|73964448 - gi\|73964448\|ref\|XP_537550.2\| PREDICTED: similar to Putative adenylate kinase 7 [Canis familiaris]	108.0	[0..30]	[112..641]

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Predicted Domain #1

Region A:
Residues: [1-123]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQTASAEV ATEKMDTAEA PAAAPAASAA APAEAESNEN TTVPSNVLSA NGGQQTGNQS  60
   61 APRNTSTVPT RQYLDSTVVP ILLQGLGALA KDRPENPIEF LANFLLREKD RYNAENQNPA 120
  121 GQQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits