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View Structure Prediction Details

Protein: trxr-2
Organism: Caenorhabditis elegans
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trxr-2.

Description E-value Query
Range
Subject
Range
gi|102499 - gi|102499|pir||S15798 glutathione reductase homolog - Caenorhabditis elegans
360.0 [0..1] [503..1]

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Predicted Domain #1
Region A:
Residues: [1-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSTFKRHL PIRRLFSSNK FDLIVIGAGS GGLSCSKRAA DLGANVALID AVEPTPHGHS  60
   61 WGIGGTCANV GCIPKKLMHQ AAIVGKELKH ADKYGWNGID QEKIKHDWNV LSKNVNDRVK 120
  121 ANNWIYRVQL NQKKINYFNA YAEFVDKDKI VITGTDKNKT KNFLSAPNVV ISTGLRPKYP 180
  181 NIPGAELGIT SDDLFTLASV PGKTLIVGGG YVALECAGFL SAFNQNVEVL VRSIPLKGFD 240
  241 RDCVHFVMEH LKTTGVKVKE HVEVERVEAV GSKKKVTFTG NGGVEEYDTV IWAAGRVPNL 300
  301 KSLNLDNAGV RTDKRSGKIL ADEFDRASCN GVYAVGDIVQ DRQELTPLAI QSGKLLADRL 360
  361 FSNSKQIVRF DGVATTVFTP LELSTVGLTE EEAIQKHGED SIEVFHSHFT PFEYVVPQNK 420
  421 DSGFCYVKAV CTRDESQKIL GLHFVGPNAA EVIQGYAVAF RVGISMSDLQ NTIAIHPCSS 480
  481 EEFVKLHITK RSGQDPRTQG CCG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.09691
Match: 1zdlA
Description: Crystal Structure of Mouse Thioredoxin Reductase Type 2
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle