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View Structure Prediction Details

Protein: CE15361
Organism: Caenorhabditis elegans
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15361.

Description E-value Query
Range
Subject
Range
CE15359 - status:Partially_confirmed UniProt:O17019 protein_id:AAB69952.1
476.0 [0..1] [540..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEREALLHTS SSPKNSELSS PTKRPSKSLL IIFALTNVAF LICFSKIKFS TGGTEVTKIA  60
   61 RPEVIVKVPT EISTTSTALS STSQFISSTN APAPRSPENK IFPQNSTDCP YE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QWNQVRTDFI PNMNFHKKLS KKWKSDFKYL YHTLPSAGAA FVHEDQIVVT LTAENQVDDT  60
   61 VYCRYYDCRR REIMDPFKST IFPRCTVFCP RRPGTKFITI SKDLNETLEY SIPIVPRLES 120
  121 NIKTQI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [239-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVLKPPKPIS EPPHYFTVCM ATLYGDEPKF LQIVDFIEYH KLQGATFFHI YLRNVSDYDR  60
   61 VLLDNYVKTG DIELITLQDH FWRADYMWHH GQINDCHHRS KHFSKWTALI DIDERLEMKS 120
  121 DKFKTVVDYL DSIQDDSISS LRFRVKWVMK HNYTPARYEN ETQLQSEMIF HKYQNTSQLG 180
  181 RERDQPKCII RPENVAMMSI HGPKDMYKGK KKIVVPEDTG FIRHYRNVEN KIFAHGYKKM 240
  241 MSHAPFNISP IDHDIDKDLS KKIMDRVKWT YEIVQPTCEQ KAKMYRVEST SPPCNNETKN 300
  301 LN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.966
Match: 1omxA
Description: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle