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View Structure Prediction Details

Protein: ins-6
Organism: Caenorhabditis elegans
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ins-6.

Description E-value Query
Range
Subject
Range
ins-7 - status:Confirmed UniProt:Q23430 protein_id:CAA92498.1
118.0 [0..7] [112..4]
gi|39597007, gi|... - gi|39597007|emb|CAE59234.1| Hypothetical protein CBG02555 [Caenorhabditis briggsae], gi|187037315|em...
gi|157751888 - gi|157751888|ref|XP_001679656.1| Hypothetical protein CBG02555 [Caenorhabditis briggsae AF16]
118.0 [0..1] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSVFTIIFV LCALQVAASF RQSFGPSMSE ESASMQLLRE LQHNMMESAH RPMPRARRVP  60
   61 APGETRACGR KLISLVMAVC GDLCNPQEGK DIATECCGNQ CSDDYIRSAC CP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.46
Match: 3lriA
Description: Insulin-like growth factor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.182470373231634 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle