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View Structure Prediction Details

Protein: CE15082
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15082.

Description E-value Query
Range
Subject
Range
CE17141 - status:Partially_confirmed UniProt:O44177 protein_id:AAB88362.1
434.0 [0..54] [374..11]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTDEQALHM VFLSHENVLS LLFNHGVTGK FLNFQKYIIS FKFPLGRNLK NSIKLLLDIS  60
   61 DSEKNWLYYS VVSLFVVSTI GATILTMSFL VLSILLWRHF KSMRFFWFLT QLTTSAFVIS 120
  121 AANLFINIPA ALSLFSKEVT QSRMFYFVSY IIDFCHYSIL FSNLVIAVQR AFVFFLRNLT 180
  181 DRFFESKVIY IWISSIYIFA FGVEYALMFS NCQYRFGELA RKYQLICETT NYANVVITMT 240
  241 TPTEVQLMET MLQIFLPLSI LIIYIAITVK IIYMKGSTLS KNETLILKQA IFVFLIFQAS 300
  301 SCVFLFAQSV QITNVGAFLV KRFVNTMEIL AGAATPSFFF FTSKEIRKLV STRVSAVSSQ 360
  361 GPSNIQVRAA RTLE

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Detection Method: FFAS03
Confidence: 1.13
Match: 1f88A
Description: Rhodopsin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle