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View Structure Prediction Details

Protein: CE14966
Organism: Caenorhabditis elegans
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14966.

Description E-value Query
Range
Subject
Range
CE12032 - status:Predicted UniProt:O16731 protein_id:AAB66195.1
470.0 [0..1] [234..1]
gi|72034838, gi|... - gi|72034838|ref|XP_799262.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus], gi|115...
70.0 [0..56] [225..360]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRMDPKSH DVIVDDLDFS TMPGTQTCIQ NSRWTVVNLK NAFQAEGPWE FVLGNNSRSY  60
   61 LNLKRTYLVY TFNITDQNGA IVTIPNPITK DSLVYAPINN IAHSIVKNFS LHINSQLAYH 120
  121 NFSNYAYKAY FENALMYGKE IKNSTLTAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.219 N/A N/A b.1.1 Immunoglobulin

Predicted Domain #2
Region A:
Residues: [150-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYFHEDEIGS PASKGFLNRC GTGTTQVAAN ISLDLMNQPR VLLNSCNVKL TAYPNNSEFL  60
   61 IEAYNHGQQK FKFNVTDVYA LVNEYSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.739 N/A N/A b.101.1 Ribonuclease domain of colicin E3
View Download 0.516 N/A N/A d.131.1 DNA clamp
View Download 0.510 N/A N/A b.101.1 Ribonuclease domain of colicin E3
View Download 0.487 N/A N/A b.101.1 Ribonuclease domain of colicin E3
View Download 0.463 N/A N/A d.131.1 DNA clamp


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle