| Protein: | CE14954 |
| Organism: | Caenorhabditis elegans |
| Length: | 473 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14954.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..1] | [473..1011] |
|
Region A: Residues: [1-473] |
1 11 21 31 41 51
| | | | | |
1 MGIKFLEFVK PFCGFVPEVS KPERKIQFRE KMLWTAITLF VFLVCCQIPL FGIMSTDSAD 60
61 PFYWLRVIMA SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG 120
121 MVITVGQAIV YVMSGLYGEP SEIGAGICLL IVVQLVIAGL IVLLLDELLQ KGYGLGSGIS 180
181 LFIATNICET IVWKAFSPAT MNTGRGTEFE GAVIALFHLL ATRSDKVRAL REAFYRQNLP 240
241 NLMNLMATFL VFAVVIYFQG FRVDLPIKSA RYRGQYSSYP IKLFYTSNIP IILQSALVSN 300
301 LYVISQMLAG KFGGNFFINL LGTWSDNTGY RSYPTGGLCY YLSPPESLGH IFEDPIHCII 360
361 YIVFMLGSCA FFSKTWIDVS GSSAKDVAKQ LKEQQMVMRG HREKSMIHEL NRYIPTAAAF 420
421 GGLCIGALSV TADFMGAIGS GTGILLAVTI IYQYFEIFVK EQQEMGGVSA MFF
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 1rh5A |
| Description: | The structure of a protein conducting channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonucleoprotein binding | 5.96221631042313 | bayes_pls_golite062009 |
| protein transporter activity | 5.55929343005534 | bayes_pls_golite062009 |
| transporter activity | 3.32223562584466 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.22714325269757 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.76187269823414 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.67782980643723 | bayes_pls_golite062009 |
| binding | 1.4562802789412 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.42890247609405 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 1.15847548838424 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 1.15316743403707 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.10003802565492 | bayes_pls_golite062009 |
| peptide transporter activity | 1.01893828721893 | bayes_pls_golite062009 |
| protein binding | 0.674651002700028 | bayes_pls_golite062009 |
