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View Structure Prediction Details

Protein: CE14936
Organism: Caenorhabditis elegans
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14936.

Description E-value Query
Range
Subject
Range
gi|73991435 - gi|73991435|ref|XP_534366.2| PREDICTED: similar to protein tyrosine phosphatase, receptor type, A is...
370.0 [0..6] [471..23]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIFGNKNT KRSKNKDGKA LASTASKDVA DPPKQGGTKG SKKPKPSRGN DEKGREPETS  60
   61 AQSKKAKKGK PKRDSKAATP ALSPGSREML SDHKKQTVED DPPLPIATSV AGTVTTTGMP 120
  121 ALLPAENATQ PLKEVVNSGK KSKGAPNSAT ATP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.953
Match: 1nw3A
Description: Catalytic, N-terminal domain of histone methyltransferase Dot1l
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [154-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSHKSTITEG ADKWVGEDVA KNWMDSIDLA EVKKEFEKLQ SMKVDVEKEC KTWKANSKYN  60
   61 QSEDFPALDS NLLKVEKDYV NISRVEIPLG RNIYIGQVPV KDTEETFWKA VFDKRIVSID 120
  121 VIVGDEPIEF FPKKAEDYKN YGQMWINNRK VEYVSDDVFR FSIEVLPHGC SNSIICNVTV 180
  181 ISNWKVDSVP VKQAIAIKEA FGLNSYLLKA PADDNAMINS QHGAGRAGYF LALAVAVHTI 240
  241 DTKVAEPCIV DIVKSIRSQR PRAVDSFCQY CSLYISLLYF IKKKVTKPAE GDKKSTPTNK 300
  301 YLHKKSVEMT KQFTNILLEA NQPSVMGPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.522879
Match: 2fh7A
Description: Crystal structure of the phosphatase domains of human PTP SIGMA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle