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View Structure Prediction Details

Protein: CE14504
Organism: Caenorhabditis elegans
Length: 633 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14504.

Description E-value Query
Range
Subject
Range
CE14496 - status:Predicted UniProt:O45885 protein_id:AAC24433.1
625.0 [0..75] [633..23]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINITQDALK LISEQLSPTS RFNLAAIDQR CFDAATKWHD VKTIVFDEED VVMAGANFVH  60
   61 TFANSSFDRA NENKVVTNAE AKEAVLKLCP AVKKLIIQTK LSDFEAVRLN KLNLKLTKLY 120
  121 ISNENLGLVN FPKFEKLRTL HLVVDSTKKL KIVDVVEPRV LKAGFPQTLT RVCLTGIYLT 180
  181 ENLLDHLASL KNLACLDLIG CLVDTRVGAK YVSKLEKMEN LDDLSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [227-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSMFSFSSK VNTSVDFNLC QLKVSKIGIY MDQYDDDNFF SQTRHFLPKN LKILVIFGNY  60
   61 FPMKKKKNQL SGNKNILILF GPNTSLASCP QANLTDVYLL SHLVRRSPYI PQEYSPNFLR 120
  121 NHDVIIGNLA WQFSLIEWKD NNGSRRDVLE LRNR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [381-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNVAPDQDVV FEGVTIAPPV ILDRLARFRE RRRMPIPAGS PNEFQVFDRV LPAPPLQVGL  60
   61 VGRVPPPPPP PPPRRRSRSR DRPRLVFSNI GGSARRRTRS APPAIQDVPA VPVRRSDSML 120
  121 TNPPSPVGTR TGAVFTATLP MITPIGGPSA ASQIGGTAPV TTEPATSVLN RGFIETLTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [560-633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSRATIGSSE SRRLSTASQA STSLNSEMTI QTTATASPER LPAPPGNPPA RVAPSSLNEQ  60
   61 NNNDNGPTQN GNEH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle