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View Structure Prediction Details

Protein: CE14496
Organism: Caenorhabditis elegans
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14496.

Description E-value Query
Range
Subject
Range
CE14504 - status:Partially_confirmed UniProt:O45886 protein_id:AAC24439.1
649.0 [0..23] [581..75]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALRPDRQA HFMQQFPKWQ ILVVTNAEAK EAVLKLCPAV KKLIIQTKLS DFEAVRLNKL  60
   61 NLKLTKLYIS NENLGLVNFP KFEKLRTLHL VVDSTKKLKI VDVVEPRVLK AGFPQTLTRV 120
  121 CLTGIYLTEN LLDHLASLKN LACLDLIGCL VDTRVGAKYV SKLEKMENLD DLSIPPSMFS 180
  181 FSSKVNTSVD FNLCQLKVSK IGIYMDQYDD DNFFSQTRHF LPKNLKILVI FGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YFPMKKKKNQ LSGNKNILIL FGPNTSLASC PQANLTDVYL LSHLVRRSPY IPQEYSPNFL  60
   61 RNHDVIIGNL AWQFSLIEWK DNNGSRRDVL ELRNRLNVAP DQDVVFEGVT IAPPVILDRL 120
  121 ARFRERRRMP IPAGSPNEFQ VFDRVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [380-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAPPLQVGLV GRVPPPPPPP PPRRRSRSRD RPRLVFSNIG GSARRRTRSA PPAIQDVPAV  60
   61 PVRRSDSMLT NPPSPVGTRT GAVFTATLPM ITPIGGPSAA SQIGGTAPVT TEPATSVLNR 120
  121 GFIETLTSTS RATIGSSESR RLSTASQAST SLNSEMTIQT TATASPERLP APPGNPPARV 180
  181 APSSLNEQNN NDNGPTQNGN EH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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