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View Structure Prediction Details

Protein: CE14367
Organism: Caenorhabditis elegans
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14367.

Description E-value Query
Range
Subject
Range
gi|4589396 - gi|4589396|dbj|BAA76744.1| asparaginyl endopeptidase (VmPE-1) [Vigna mungo]
577.0 [0..2] [449..3]

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Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLALLICI IVLFLVTEAR YNPRKGLAAG RQRKHKYQDE GEAFVVLVAG SNGWYNYRHQ  60
   61 ADVAHAYHTL RNHGIPEENI ITMMYDDVAN NPLNPYKGKL FNRPHGKDLY KGLKIDYKGA 120
  121 SVTPENFLNV LKGNASGIDG GNGRVLETND NDRVFVYFTD HGAVGMISFP DGILTVKQLN 180
  181 DVLVWMHKNK KYSQLTFYLE ACESGSMFEE VLRSDMDIYA ISAANSHESS WGTFCENDMN 240
  241 LPCLGDLFSV NWMTDSDGED LKTETLEFQY ELVKKETNLS 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.58
Match: 1i4eB
Description: Caspase-8
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [281-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVMQFGDKDI AKEAVALFQG DKEDREYVED FGLSASKSVN WPARDIELNH LISQHRKSND  60
   61 LLSSNKLEYK INRIKETRRA IKRNVHMIVQ KFFDGESEDL ISRVLTQTRP VLDLRCHHIA 120
  121 VHLFKKYCIN FNEYEYAMKY VKVINNMCIY RRIEEIVLAL PDICMDIDIE QEVAIRLEKE 180
  181 FL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle