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View Structure Prediction Details

Protein: CE14337
Organism: Caenorhabditis elegans
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14337.

Description E-value Query
Range
Subject
Range
gi|46107656, gi|... - gi|46107656|ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1], gi|42547814|gb|E...
244.0 [0..52] [445..1460]

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Predicted Domain #1
Region A:
Residues: [1-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQIILSEKI EAEKRTDWRS MWIAIVMQFV VGVQISVYYM SMWPYLSGVS FIDNMESKKF  60
   61 QTFQLDKTAD FDFLGWVVAS CSIGCTIANP IYGYWNQKTM SVKWPVITGF LIAAVGQLWY 120
  121 ALLGFFGNVK WFMLCARFLT GLGVGNIAAL RVYAAMASTP KDRMRAISFG TGGFVLGFSF 180
  181 GPVISSIFTP LGEEGIQFGG FILNMYTIVS YLMVLICLSA CLVVYLFFKE SYAGIVTKEE 240
  241 KEKDEVEVPM FDIPASLICI YLFMIVNMTA TNIEVMSSPL TTVLYDWKDS DSIFYNGIAL 300
  301 AISSAISVAF NIAQGSTRIG RIDKRKQMLF GLTFFLLYQL FMYPWGFYSG PLNFLPKGVE 360
  361 TKVAGGCYSE YLWCNDTTRV PLFIYLFCFI VFFGVAFPFV ETPAPALFSE ILGPRKQGTM 420
  421 QGFFSFGGSL APVIASISST AIFKYSGYRY VIVLQASTLL VAIVLILIFY KRLVPLKVVK 480
  481 KCKDSSSSMS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.39794
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle