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View Structure Prediction Details

Protein: CE14227
Organism: Caenorhabditis elegans
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14227.

Description E-value Query
Range
Subject
Range
gi|157747963 - gi|157747963|ref|XP_001669076.1| Hypothetical protein CBG20281 [Caenorhabditis briggsae AF16]
gi|39580980, gi|... - gi|39580980|emb|CAE72950.1| Hypothetical protein CBG20281 [Caenorhabditis briggsae], gi|187023528|em...
230.0 [0..1] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTKAYVLA LAGCTNSGKS TLAKEFQRFF GAGETTIINQ DEFYKTENEV EKIYHPDAEH  60
   61 LTDEGYYWSF DEKEAINIDQ FRQRILNESK VYKNVIIDGN MITEMDEIVD LCDRIVVMTL 120
  121 DFKTCKRRRE ARTDYVPADT PGYFVNVAFP AYVRHLERAR QRSRTDSRLT FIDVSESKFD 180
  181 DKNKSIVNFR QQILDDHIKL TDEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.30103
Match: 1udwA
Description: Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.00104173493322 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [205-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDVKVVDQLV SHPSCGAIST FNGVTRDNHG GRDVSNLSYD CHDLMAYKKL RGICAEIRAE  60
   61 YPDVKKIAIF HRLGKVDIGE SSVIISTSSP HRKTAIQATE KCIDLLKEHA PIFKYEEYSN 120
  121 GEVDGVWKSN IEDSKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1fm0E
Description: Molybdopterin synthase subunit MoaE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.740488970089403 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle