| Protein: | lgc-34 |
| Organism: | Caenorhabditis elegans |
| Length: | 390 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-34.
| Description | E-value | Query Range |
Subject Range |
|
|
337.0 | [0..20] | [378..91] |
|
Region A: Residues: [1-390] |
1 11 21 31 41 51
| | | | | |
1 MRNIFLFLVL LSIGVCSAQK AFHSRRLGTE GQIVGRILSE YDSSSRPPVR DHADNSAILV 60
61 ITNIFINRLI WHNNYAEVDL YLRQQWQDSR LKYDVDTREG IDEIRLPGNR KIWEPDTYFT 120
121 SGKELSRNEK NSKHIVVEPS GYIRSSERVL LELPYAYGTM FPFTNSRQFT IKLGSYNYDI 180
181 DDIVYLWANS PPLVNPIEVS QDLLKGDLTF EEASAGDCVG NYTVGVYSCI DAHVYFSAST 240
241 ISGLMSWFLP SLFLLIGSWL HFWIHGSWSV PRTISAAVPF FILAAYYIFM REDSYTQAQG 300
301 AWLAFCLVLT FFSFVEYFLV ICCGGRRSIR YKTLGPQEDH PMGAAKETVE VAYNEGCASF 360
361 RDNNGIDVIS RVAFPIVTIV FLIIYFIFIV
|
| Detection Method: |  |
| Confidence: | 73.39794 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
