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View Structure Prediction Details

Protein: CE14040
Organism: Caenorhabditis elegans
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14040.

Description E-value Query
Range
Subject
Range
gi|39581610, gi|... - gi|39581610|emb|CAE58395.1| Hypothetical protein CBG01524 [Caenorhabditis briggsae], gi|187038158|em...
gi|157760097 - gi|157760097|ref|XP_001672391.1| Hypothetical protein CBG01524 [Caenorhabditis briggsae AF16]
189.0 [0..1] [99..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVPGFNPL RQVDANGKEC RGNVELPFCK GYCKTSESGT HGFPPRVQNS KVCTLVTTST  60
   61 RKVVLDDCDD GADESVKFVM VPHGTDCECS AVPLEQHHS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.29
Match: 1hcnB
Description: Gonadotropin B chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle