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View Structure Prediction Details

Protein: CE13982
Organism: Caenorhabditis elegans
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13982.

Description E-value Query
Range
Subject
Range
gi|39579374, gi|... - gi|39579374|emb|CAE56305.1| Hypothetical protein CBG23963 [Caenorhabditis briggsae], gi|187040612|em...
223.0 [0..1] [325..3]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLTFLAWV IIAAFFYLLT LLALKFKTIR LLILLLAFLP IAIMLAFFIF RIPQLINETH  60
   61 KTQFFDTWKI GGHRGSAHDN IPENSLEAFS AVKSEGGQLA EMDIQITMDG VPVICHDSNT 120
  121 VRVTGVDKEI SAMNITEFRK LRFIGTNVSL PTFEEAVAHC VANNIMMIWD VKNVDENLLK 180
  181 QFVIQIRTYN LYSKVLVSGF NPIDTYLVKM ADPKILTGFT WRSWELSTTD EAATTPRFTG 240
  241 TLHAVASVLD VLAFGLARSL IIPKFLGSDV IFYHVSDISR FLKTDAAANN IYLAGWTSNN 300
  301 QYEQVWLRDY LKVPFLTDNV GTVPH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1ydyA
Description: Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoric diester hydrolase activity 0.385672986556388 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.219982353350385 bayes_pls_golite062009
binding 0.146783912409894 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle