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View Structure Prediction Details

Protein: CE13796
Organism: Caenorhabditis elegans
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13796.

Description E-value Query
Range
Subject
Range
CE13794 - status:Partially_confirmed UniProt:P91467 protein_id:AAB37589.1
700.0 [0..13] [459..34]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVWILATTS MIMCAQMTPE ASLSLTSQVY SRINPNISFS NNGSYTTLNQ ILEPDRLMKW  60
   61 YMTVKSLDTA IVDMEYFFET HYEYIKKKNN SEKFSFMVET LKNVNLTLTN IFYNSLYANI 120
  121 EVLNQLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPASEENKFL HHIFNMLKNN TIEEIWSSSF SDESKKEFDK KNWKIQNDLD TEIAEKILRL  60
   61 GAIDTATKYL AKRIPGYEPE FLFSAFASNT ENEAFKHNSA IYSGIVPRND LQQPMLAVRE 120
  121 YSTLILMFMS VMGVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [263-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFCWLTIADT FSVLAHELMH FVYPSGTELL TPNVTKAANK CTQDEVKMMG DSDAVKPIDG  60
   61 WFSKKVTHED LANIMGLRMV MKMAAKKSVN EEQLKNALET ILGGLCIQGK PKNSILPHHH 120
  121 PFEISINTAV RQYPLFSSLY GCRPGDRMFA EAEKFCNPLG GEVNLEDYKI KNDTEDIGGF 180
  181 FNYIMDTANA FNFSIEN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle