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View Structure Prediction Details

Protein: CE13696
Organism: Caenorhabditis elegans
Length: 407 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13696.

Description E-value Query
Range
Subject
Range
CE16028 - status:Partially_confirmed UniProt:O45513 protein_id:CAB04380.1
458.0 [0..11] [340..9]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIHPYWFK ICCLVFIIFL FFFQKAKFER SSCFCKSRKS GKTYDFCYEN PRNPESIGAK  60
   61 FNCNLLDTLE ELGLISETER IPSLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIINDESAVV FVSSTSDDHL HLSLKSYNSI REFYPHHKYI LHGLNLSAAY IDKLPRNDEN  60
   61 FEFRAFNTST YPKFVSNWMT YNFKPLLMAQ MLKEFPAVWW IDAHIGVVKP NIIGNLYEEI 120
  121 KTERLSDDYA SVIAESLAPH SNFAVLNPKL LKFFPTSSLE LLKQRTQVQA GLIFLARTRY 180
  181 TMKLFKWMVL CALTEDCMNP PGSQSICIFL HDWNKYYADC FRYDQSIINL LLVNDFTGIH 240
  241 KYYSEKLSSS FVKVIILNII LNIFTFRSAR HYSGSPRREK VDEAGNESPE SKHYMKVVQL 300
  301 LGSRGSKKAR KKSTDPYAAL QS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.976
Match: 1ss9A
Description: Crystal Structural Analysis of Active Site Mutant Q189E of LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle