| Protein: | cav-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 235 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cav-1.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..1] | [235..1] |
|
|
252.0 | [0..63] | [221..132] |
|
|
247.0 | [0..89] | [221..77] |
|
|
247.0 | [0..89] | [221..46] |
|
|
246.0 | [0..89] | [221..38] |
|
|
246.0 | [0..89] | [221..38] |
|
|
245.0 | [0..89] | [223..38] |
|
|
245.0 | [0..89] | [221..38] |
|
|
245.0 | [0..89] | [221..38] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MSTEQDIKTE EQIPLTYAAV AAPTVQTEGE AVVAPEEPKP KKNWFTFGKK KAAPTDETNI 60
61 EEGGAPGDEP VKEKKEKKCW WSRCQKGEGE QKEENIAIGV DLVNRDANSM NNHVQLNFED 120
121 IFGEADSQHS WDCVWRLNHT VFTAVRLFIY RLVSLLALPF TIIFAIFFGL LASINVFIIV 180
181 PLGKLLSIPG TLLAKLWNWL IHAIFDPIAS AVGLIFSNFN IRKYGINQET TAPCV
|
| Detection Method: |  |
| Confidence: | 109.958607 |
| Match: | PF01146.8 |
| Description: | No description for PF01146.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.431 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.386 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.348 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.339 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
